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End-to-end learning for computational microscopy

Laura Waller – Professor, UC Berkeley

Thu, 4-Feb-2021 / 4:30pm / Zoom: https://stanford.zoom.us/meeting/register/tJckfuCurzkvEtKKOBvDCrPv3McapgP6HygJ

Talk

• Video

Abstract

Computational imaging involves the joint design of imaging system hardware and software, optimizing across the entire pipeline from acquisition to reconstruction. Computers can replace bulky and expensive optics by solving computational inverse problems. This talk will describe end-to-end learning for development of new microscopes that use computational imaging to enable 3D fluorescence and phase measurement. Traditional model-based image reconstruction algorithms are based on large-scale nonlinear non-convex optimization; we combine these with unrolled neural networks to learn both the image reconstruction algorithm and the optimized data capture strategy.

Bio

Laura Waller is the Ted Van Duzer Associate Professor of Electrical Engineering and Computer Sciences (EECS) at UC Berkeley, a Senior Fellow at the Berkeley Institute of Data Science, and affiliated with the UCB/UCSF Bioengineering Graduate Group. She received B.S., M.Eng. and Ph.D. degrees from the Massachusetts Institute of Technology (MIT) in 2004, 2005 and 2010, and was a Postdoctoral Researcher and Lecturer of Physics at Princeton University from 2010-2012. She is a Packard Fellow for Science & Engineering, Moore Foundation Data-driven Investigator, Bakar Fellow, OSA Fellow and Chan-Zuckerberg Biohub Investigator. She has recieved the Carol D. Soc Distinguished Graduate Mentoring Award, Agilent Early Career Profeessor Award (Finalist), NSF CAREER Award and the SPIE Early Career Achievement Award.